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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30722132_30725801_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30722132 - 30725801

Intron Length:

3670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTGACAAA

5'SS Class:

weak_major

3'SS Sequence:

TCCCTAGAGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CTTCCCTAGAGA

Flanking Amino Acid:

QVSSEIRYGIEFSFKVQGSY

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.2

52.2

40.3

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

48.6

-0

1.2

37.8

Minor 5ss

33.2

-1.9

3.1

36.7

Minor BPS

48.9

-0

63.57

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008471

30719788 - 30734154

14367