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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30723282_30723341_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30723282 - 30723341

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAGCTTCA

5'SS Class:

weak_major

3'SS Sequence:

GGACACCAGCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

GCAGGCTTCATT

Flanking Amino Acid:

IHVTPDPDHLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.3

53.6

40.5

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

-0.3

1.1

31.1

35.9

Minor 5ss

46.8

-0.3

2.9

63.7

41.9

Minor BPS

43.7

-0.4

2.2

56.66

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020071

30723277 - 30734154

10878