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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30728534_30728957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30728534 - 30728957

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTAGG

5'SS Class:

major

3'SS Sequence:

TTCCTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TCCTCTCCAATG

Flanking Amino Acid:

TYLTGLSGTTWTMSNLYRDA

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

65.4

Major BPS

64.1

0.35

1.2

45.5

Major PPT

81.9

0.72

0.7

76.3

32.2

Minor 5ss

33.9

-1.8

38.8

41.6

Minor BPS

46.5

-0.4

1.9

51.58

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040768

30719764 - 30734154

14391

ENSAPLT00000020071

30723277 - 30734154

10878

ENSAPLT00000008471

30719788 - 30734154

14367