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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30729181_30729870_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30729181 - 30729870

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

GGAATCACAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TTTGTCTCAATA

Flanking Amino Acid:

LVLESLLHDGDNHRLSDQQR

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.1

60.1

41.3

Major BPS

69.1

0.48

32.1

Major PPT

46.7

-0.1

1.1

40.3

Minor 5ss

36.2

-1.6

3.6

49.3

Minor BPS

63.5

0.42

1.6

74.85

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020071

30723277 - 30734154

10878