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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30730502_30731280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30730502 - 30731280

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

LPESRICFLEGIWSSLFSLN

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.2

39.3

Major BPS

72.1

0.55

1.1

44.2

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

-0.2

2.8

59.7

45.1

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040768

30719764 - 30734154

14391

ENSAPLT00000020071

30723277 - 30734154

10878

ENSAPLT00000008471

30719788 - 30734154

14367