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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30731310_30732029_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30731310 - 30732029

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGTTATAC

5'SS Class:

weak_major

3'SS Sequence:

TCACTGTGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TAAAATTTAACC

Flanking Amino Acid:

GIWSSLFSLNEEPLLPLKPH

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.17

1.1

55.7

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

47.4

-0.1

1.7

52.2

41.5

Minor 5ss

41.4

-1

54.3

43.5

Minor BPS

0.29

1.5

66.62

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020071

30723277 - 30734154

10878