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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30731389_30732033_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30731389 - 30732033

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCAGAGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TAAAATTTAACC

Flanking Amino Acid:

RWTQDKMDNIEPLLPLKPHE

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

1.1

85.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

46.7

-0.1

1.2

42.3

41.7

Minor 5ss

38.2

-1.3

2.8

46.3

Minor BPS

0.29

1.5

66.62

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040768

30719764 - 30734154

14391