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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30778620_30781165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30778620 - 30781165

Intron Length:

2546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGCTTGTTAACC

Flanking Amino Acid:

NDTFREYKAPGVKRSPSEMA

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

73.2

0.52

0.9

70.9

40.1

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

59.1

0.27

2.1

70.25

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008787

30762312 - 30781476

19165