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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30809_31829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30809 - 31829

Intron Length:

1021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CTACCTGTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

ACTACACTAACT

Flanking Amino Acid:

VGASWKEPFPGWIDNFNGPS

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

39.3

Major BPS

68.7

0.47

0.9

67.9

Major PPT

60.7

0.24

56.8

38.6

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

51.6

0.13

73.58

42.5

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009