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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30822047_30825083_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30822047 - 30825083

Intron Length:

3037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTGGTCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TATCGTGTGACT

Flanking Amino Acid:

WMNNVFFRNNVNVEIENIYI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

0.65

0.9

72.8

37.5

Minor 5ss

37.5

-1.4

2.7

45.1

35.9

Minor BPS

45.4

-0.2

2.4

69.07

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002