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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30826461_30827285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30826461 - 30827285

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTTTTCAAACT

Flanking Amino Acid:

FQISSIRLDKEEFGGRADHL

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.6

0.64

0.9

72.3

37.9

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

53.5

0.19

78.25

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002