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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30835451_30836260_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30835451 - 30836260

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTAT

5'SS Class:

weak_major

3'SS Sequence:

GACACTCTGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TGTCTCCTGACA

Flanking Amino Acid:

QITASIQKHKALEAECNSHR

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

76.7

34.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

0.11

41.1

Minor 5ss

62.3

0.41

2.1

75.5

40.6

Minor BPS

55.8

0.18

1.7

69.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002