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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30839551_30840107_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

30839551 - 30840107

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCCTT

5'SS Class:

weak_minor

3'SS Sequence:

TTTTCTGTTTTAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

TCTTCTTGTACC

Flanking Amino Acid:

NVEVMQQKYQSFLTELAAGK

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

65.3

Major BPS

64.3

0.36

65.6

31.9

Major PPT

85.8

0.8

0.7

85.1

29.7

Minor 5ss

0.64

2.3

82.6

36.8

Minor BPS

58.2

0.24

1.8

71.13

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002