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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30842178_30842953_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30842178 - 30842953

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTT|GCAAAATCG

5'SS Class:

weak_major

3'SS Sequence:

GCTTTTGACAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

AGGCTTTTGACA

Flanking Amino Acid:

ERKIEYLRSVLKLETQNKRD

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.4

47.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

58.5

0.19

1.1

59.2

40.2

Minor 5ss

29.9

-2.3

4.1

45.2

43.9

Minor BPS

0.12

1.2

57.9

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002