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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30847765_30847879_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30847765 - 30847879

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTACCAAAT

5'SS Class:

weak_major

3'SS Sequence:

CATTATGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAGAT

U12 Branch Point Sequence:

TGGCCATTATGC

Flanking Amino Acid:

KTVLELSLPSFSIQNKMSEL

Intron Amino Acid Position:

1271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.2

57.5

41.3

Major BPS

65.3

0.38

60.7

37.6

Major PPT

0.52

65.8

40.3

Minor 5ss

42.2

-0.9

3.3

63.2

42.6

Minor BPS

-0.4

2.1

53.86

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002