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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30856114_30857065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30856114 - 30857065

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

ATGTCTTACATG

Flanking Amino Acid:

REIRQKQKELRNSWEELLEI

Intron Amino Acid Position:

1704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

0.61

0.8

69.8

36.6

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

45.6

-0.4

2.1

52.6

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002