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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30857181_30859207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30857181 - 30859207

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TAATCCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGATTTTAATC

Flanking Amino Acid:

DLTDALAHIEEKSKSIPDGI

Intron Amino Acid Position:

1743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.34

58.9

42.4

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

66.2

0.49

1.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002