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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30887553_30888284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30887553 - 30888284

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCAATAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTTCCAATAAAA

Flanking Amino Acid:

IYQRRKQLNEKWNSFRGNLN

Intron Amino Acid Position:

2234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

80.7

33.7

Major BPS

71.8

0.54

1.2

32.5

Major PPT

61.1

0.25

1.1

62.1

36.7

Minor 5ss

35.6

-1.6

2.8

42.7

38.3

Minor BPS

52.4

0.07

73.18

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002