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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30907008_30908787_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30907008 - 30908787

Intron Length:

1780

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCATGAATA

5'SS Class:

major

3'SS Sequence:

AGATGTAATTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCATCTTTAAAA

Flanking Amino Acid:

AIQTRTEVGNDLVLQSILSL

Intron Amino Acid Position:

2849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.4

69.4

40.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

49.9

-0

1.2

51.1

45.8

Minor 5ss

35.2

-1.7

4.1

53.1

44.1

Minor BPS

63.6

0.42

1.4

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002