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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30910210_30910716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30910210 - 30910716

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

GCATTTCCAATG

Flanking Amino Acid:

MKNGHFMSVEIEEKLLELSE

Intron Amino Acid Position:

2997

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

72.8

34.5

Major BPS

71.8

0.54

1.2

32.5

Major PPT

0.77

0.8

77.1

37.1

Minor 5ss

40.2

-1.1

2.7

49.4

46.8

Minor BPS

42.1

-0.7

1.7

41.15

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008702

30821936 - 30911937

90002