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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30929415_30930976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30929415 - 30930976

Intron Length:

1562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

TTCAGCTCACGG

Flanking Amino Acid:

NDTFKEFKEPGVKRSHSEME

Intron Amino Acid Position:

831

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.3

36.4

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

86.2

0.81

0.7

24.1

Minor 5ss

44.3

-0.6

2.8

53.8

44.4

Minor BPS

37.6

-1

2.3

43.64

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009472

30929170 - 30963334

34165