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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30958053_30963276_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

30958053 - 30963276

Intron Length:

5224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGACATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTCCTCTCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

0.54

0.9

66.5

39.1

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

51.6

0.13

1.9

73.07

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009472

30929170 - 30963334

34165