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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31023657_31026615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31023657 - 31026615

Intron Length:

2959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TGAGACTTAAAC

Flanking Amino Acid:

CKHLISVSGDSCIFIWRLSS

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

0.47

69.9

32.6

Major PPT

86.5

0.82

0.7

84.3

23.5

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

53.3

0.08

1.7

62.76

41.8

Associated Gene:

Gene:

MAPKBP1

Ensembl Gene ID:

ENSAPLG00000009844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041731

31003056 - 31093289

90234

ENSAPLT00000010270

31004335 - 31093289

88955