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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31045650_31068100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31045650 - 31068100

Intron Length:

22451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

GTTTCCTCCATG

Flanking Amino Acid:

PRTGLVAYPAGCVVVLFNPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.4

38.7

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

74.6

0.55

0.8

70.4

29.5

Minor 5ss

28.6

-2.5

2.7

27.3

36.3

Minor BPS

52.6

-0

2.1

64.4

43.7

Associated Gene:

Gene:

MAPKBP1

Ensembl Gene ID:

ENSAPLG00000009844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041731

31003056 - 31093289

90234

ENSAPLT00000010270

31004335 - 31093289

88955