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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31120337_31129847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31120337 - 31129847

Intron Length:

9511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

AAAACTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTCATTTTAAAA

Flanking Amino Acid:

SEEEIDVEKVDACEYSEDDE

Intron Amino Acid Position:

2447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.4

0.28

1.1

51.1

46.9

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

54.4

0.13

1.5

60.21

40.1

Associated Gene:

Gene:

MGA

Ensembl Gene ID:

ENSAPLG00000010304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010762

31108935 - 31159269

50335