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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31141121_31141533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31141121 - 31141533

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACAT

Flanking Amino Acid:

QKESQSSFIKIYEQGLQSSK

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

88.2

0.86

0.6

84.1

24.1

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

70.1

0.71

1.7

88.72

36.1

Associated Gene:

Gene:

MGA

Ensembl Gene ID:

ENSAPLG00000010304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023063

31108935 - 31159269

50335

ENSAPLT00000010762

31108935 - 31159269

50335