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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_31199077_31200358_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
31199077 - 31200358
Intron Length:
1282

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAACAGAT
5'SS Class:
major
3'SS Sequence:
GTTTGCTCTCAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAG
U12 Branch Point Sequence:
AGCTCGTTACTG
Flanking Amino Acid:
LEWIQDNITQGEMIVQDTKA
Intron Amino Acid Position:
445

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.7
0.68
1.1
75.1
35.1
Major BPS
76
0.65
1.5
85.7
34.9
Major PPT
68.1
0.41
1.1
64.7
41.7
Minor 5ss
37.6
-1.4
3.5
55.7
48.5
Minor BPS
45
-0.5
2.3
49.82
44.7

Associated Gene:

Gene:
TYRO3
Ensembl Gene ID:
ENSAPLG00000010456
Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010997
31183291 - 31220930
37640