Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_31217796_31220578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31217796 - 31220578

Intron Length:

2783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAGTAT

U12 Branch Point Sequence:

GGAGTAGTATTT

Flanking Amino Acid:

ALRDGAAAAAGMKFTGSPIK

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

63.9

42.4

Major BPS

46.8

-0.2

1.6

45.8

47.2

Major PPT

87.1

0.83

0.7

86.1

27.7

Minor 5ss

25.7

-2.8

3.1

32.8

42.2

Minor BPS

35.3

-1

2.1

46.7

39.3

Associated Gene:

Gene:

TYRO3

Ensembl Gene ID:

ENSAPLG00000010456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010997

31183291 - 31220930

37640