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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31272656_31273101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31272656 - 31273101

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTAAAAG

5'SS Class:

major

3'SS Sequence:

TCCTTTATATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CTTCCTTTATAT

Flanking Amino Acid:

PSPRQKKTKKGMQARFSLKG

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.2

58.8

39.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

74.1

0.54

0.9

74.8

33.4

Minor 5ss

34.6

-1.7

2.8

40.2

45.6

Minor BPS

56.4

0.28

1.7

74.45

42.4

Associated Gene:

Gene:

RPAP1

Ensembl Gene ID:

ENSAPLG00000011725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012285

31256157 - 31296556

40400

ENSAPLT00000044097

31256157 - 31296556

40400