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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31282808_31284120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31282808 - 31284120

Intron Length:

1313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTCC

5'SS Class:

major

3'SS Sequence:

TGATTCTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TATTCTGTGATT

Flanking Amino Acid:

AGYGQACDIYRDLYPVLVRI

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

67.7

38.6

Major BPS

79.4

0.73

80.1

Major PPT

69.7

0.44

63.6

42.6

Minor 5ss

36.9

-1.5

3.4

45.8

Minor BPS

58.1

0.34

79.26

37.5

Associated Gene:

Gene:

RPAP1

Ensembl Gene ID:

ENSAPLG00000011725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012285

31256157 - 31296556

40400

ENSAPLT00000044097

31256157 - 31296556

40400