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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31294755_31295554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31294755 - 31295554

Intron Length:

800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTAATTTAAGT

Flanking Amino Acid:

FIFSQDSTTQEADAARKSML

Intron Amino Acid Position:

1414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.5

0.64

0.8

77.1

37.1

Minor 5ss

-1.6

3.1

50.1

46.4

Minor BPS

56.3

0.28

1.8

76.06

40.4

Associated Gene:

Gene:

RPAP1

Ensembl Gene ID:

ENSAPLG00000011725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044097

31256157 - 31296556

40400

ENSAPLT00000012285

31256157 - 31296556

40400