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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31349435_31400276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31349435 - 31400276

Intron Length:

50842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

TGTTTTGTTATA

Flanking Amino Acid:

WLLQNCHGKEVVVFCAGSHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

54.4

0.11

61.4

34.3

Major PPT

81.3

0.7

0.9

76.5

37.7

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

46.1

-0.3

2.2

62.48

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024278

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026482

31349356 - 31427735

78380