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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31417916_31422659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31417916 - 31422659

Intron Length:

4744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTGAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TCTTCCTGAAAA

Flanking Amino Acid:

VTLPMPVLQNRFKLQLLATW

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.7

35.3

Major BPS

0.57

73.6

28.6

Major PPT

61.3

0.25

1.1

35.8

Minor 5ss

34.2

-1.8

2.9

42.9

43.6

Minor BPS

69.9

0.62

1.5

77.84

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024278

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026482

31349356 - 31427735

78380