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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31434477_31437217_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31434477 - 31437217

Intron Length:

2741

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCTAGAGGC

5'SS Class:

weak_major

3'SS Sequence:

TGGAAGGAGCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

ATCACCTTAAGA

Flanking Amino Acid:

LQARLQSPEYK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.5

56.4

42.4

Major BPS

78.3

0.7

32.1

Major PPT

46.8

-0.1

1.2

31.9

45.4

Minor 5ss

-3.6

3.8

31.2

Minor BPS

0.43

1.7

70.43

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012506

31434472 - 31453247

18776