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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31442613_31445027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31442613 - 31445027

Intron Length:

2415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

ATTCCCTTACCA

Flanking Amino Acid:

SFLRQNRPRVNQPPTLTMQD

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.7

29.2

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

37.4

-1.4

44.1

44.7

Minor BPS

70.6

0.64

1.6

79.53

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019471

31436630 - 31453247

16618

ENSAPLT00000012506

31434472 - 31453247

18776