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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31448495_31449998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31448495 - 31449998

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGAAACCTAATT

Flanking Amino Acid:

EGIFTSKTDTWSFGVLLWEI

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

66.6

0.37

61.7

39.2

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

49.1

0.01

1.9

68.83

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019471

31436630 - 31453247

16618

ENSAPLT00000012506

31434472 - 31453247

18776