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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31450134_31450494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31450134 - 31450494

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CCTTCATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCCTCCTTCATT

Flanking Amino Acid:

MDPPKNCPGPVYRIMTQCWQ

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

72.1

0.5

75.3

32.3

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

66.7

0.61

1.8

79.08

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019471

31436630 - 31453247

16618

ENSAPLT00000012506

31434472 - 31453247

18776