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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31471901_31495554_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
31471901 - 31495554

Intron Length:
23654

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGACG

5'SS Class:
major

3'SS Sequence:
TTCTGCATTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAC

U12 Branch Point Sequence:
TTTTTCTGCATT

Flanking Amino Acid:
HLEHGEEHNQKKAWNTIKTM

Intron Amino Acid Position:
169

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1
67
44.2

Major BPS
80.9
0.77
0.8
81.7
25.4

Major PPT
79.3
0.66
0.9
70.1
40.1

Minor 5ss
31.2
-2.2
3.3
39.9
45.9

Minor BPS
60.4
0.41
1.9
84.15
37

Associated Gene:

Gene:
ITPKA

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31460865 - 31496058
35194