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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31508829_31511697_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31508829 - 31511697

Intron Length:

2869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTATGAAAT

5'SS Class:

major

3'SS Sequence:

CTCCCACCCTAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TAATTCACAACA

Flanking Amino Acid:

NSEQIEKIKKLAAVQNTKEL

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.1

68.1

36.2

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

58.2

0.18

60.5

28.6

Minor 5ss

43.8

-0.7

63.5

42.1

Minor BPS

52.5

0.07

1.8

66.91

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017910

31508783 - 31515430

6648