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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31512479_31515327_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31512479 - 31515327

Intron Length:

2849

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTA|GCAGCTTCT

5'SS Class:

weak_major

3'SS Sequence:

TCCTTGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTCACACAAAC

Flanking Amino Acid:

RSSLRTSPSGNSFHVPTEDW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.3

57.5

41.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.9

0.63

0.9

71.9

Minor 5ss

38.5

-1.3

4.2

59.7

40.3

Minor BPS

45.7

-0.3

64.37

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017910

31508783 - 31515430

6648