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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31559866_31560440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31559866 - 31560440

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAA

U12 Branch Point Sequence:

AAGTAGCTAACT

Flanking Amino Acid:

NIVESEKALVAESHSMKNQQ

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

48.1

-0.1

0.9

53.4

30.8

Major PPT

83.5

0.75

0.8

80.8

31.2

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

44.6

-0.3

2.4

65.6

44.3

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096