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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31562184_31562755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31562184 - 31562755

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACAGC

5'SS Class:

major

3'SS Sequence:

TCTGGTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ACATGCATATCC

Flanking Amino Acid:

YKFNDQDIEEIVKEKERFRK

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.5

41.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

79.5

0.66

0.9

72.2

Minor 5ss

39.1

-1.2

52.1

44.7

Minor BPS

43.9

-0.4

2.2

54.46

43.2

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096