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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31562864_31562948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31562864 - 31562948

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTATTGTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GAAAACTAAACT

Flanking Amino Acid:

ESEFMKWKEAMFSAGMQLPT

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

79.1

37.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.4

0.57

74.5

40.2

Minor 5ss

44.3

-0.6

2.8

59.1

45.3

Minor BPS

48.9

-0

1.9

65.26

44.1

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096