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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31569011_31571635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31569011 - 31571635

Intron Length:

2625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGG

5'SS Class:

strong_major

3'SS Sequence:

TATCTGCTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTTTGTTCAAAT

Flanking Amino Acid:

RIEKREVLKRRFEIKKKLKT

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

72.1

40.4

Major BPS

77.3

0.68

81.5

Major PPT

67.6

0.4

62.8

38.1

Minor 5ss

38.9

-1.2

2.9

49.7

46.6

Minor BPS

0.27

2.1

81.38

40.3

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096