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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31571841_31573336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31571841 - 31573336

Intron Length:

1496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

AACTTCGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TGTCTTGTAACT

Flanking Amino Acid:

SSAESSAPEEGEVSDSESNS

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

73.9

32.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

69.7

0.44

0.9

66.4

39.8

Minor 5ss

36.8

-1.5

46.2

Minor BPS

55.6

0.26

77.46

39.1

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096