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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31582406_31584654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31582406 - 31584654

Intron Length:

2249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGCGGG

5'SS Class:

major

3'SS Sequence:

TTTTTCACACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTTTTTTCACA

Flanking Amino Acid:

DSGSEENLDQELLSLAKRKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

54.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.6

0.64

0.9

72.4

37.6

Minor 5ss

29.2

-2.4

3.4

37.8

Minor BPS

63.6

0.42

1.7

75.16

36.6

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096