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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31584724_31584763_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31584724 - 31584763

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGGGCGGG

5'SS Class:

major

3'SS Sequence:

CGCCATGGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGCCAT

U12 Branch Point Sequence:

GCAGCCGGCACC

Flanking Amino Acid:

PPLAGREGGRKRKGRVLIDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.2

51.2

42.8

Major BPS

-0.3

1.4

49.7

Major PPT

49.4

-0

1.2

47.3

39.2

Minor 5ss

18.1

-3.7

3.9

19.1

38.2

Minor BPS

37.7

-0.9

2.4

44.36

43.4

Associated Gene:

Gene:

RTF1

Ensembl Gene ID:

ENSAPLG00000013054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013651

31556758 - 31584853

28096