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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31596447_31596639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31596447 - 31596639

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AGTATGTTAACT

Flanking Amino Acid:

EKGLPHNNSKKRTAGKTFLF

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

80.3

32.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

75.9

0.58

0.8

69.4

36.9

Minor 5ss

44.1

-0.6

3.3

66.4

45.1

Minor BPS

55.9

0.26

2.1

75.62

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038590

31592056 - 31603618

11563