Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_31598110_31599705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31598110 - 31599705

Intron Length:

1596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAGAG

5'SS Class:

major

3'SS Sequence:

CTTATTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATGTCTAATC

Flanking Amino Acid:

KEQPEKTSTKGDIHPVGGKI

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

40.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.4

0.48

1.1

45.5

Minor 5ss

28.8

-2.4

3.4

38.2

46.7

Minor BPS

50.2

-0

67.54

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038590

31592056 - 31603618

11563

ENSAPLT00000014134

31592056 - 31603618

11563