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Intron Name: Anas_platyrhynchos_platyrhynchos_5_31628662_31629700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31628662 - 31629700

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTACATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

DKISRDELLQVLRMMVGVNI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

83.8

27.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.5

0.53

65.8

39.5

Minor 5ss

35.4

-1.7

2.8

44.9

43.2

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

CHP1

Ensembl Gene ID:

ENSAPLG00000013582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026174

31625732 - 31639709

13978

ENSAPLT00000014163

31625732 - 31643034

17303